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As a **developer** I want **to monitor the number of hits in every L2G iteration** because **it is an important indicator tof the model's selectivity**
## Background
The number of genes that receive…
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The API already contains new datasource with the new associations in the associations endpoint.
We would like to add a new column to the heatmap:
Column name `GWAS credible sets` (subject to changes)…
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Hello,
I am having issues running xCell using the Charoentong signatures. This analysis won't run on the webpage and produes the error below. If I select the xCell signatures and use the same data…
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We have discussed the possibility to implement a PheWas plot from credible sets.
This ticket will incorporate scoping of such visualisation, also taking into account the existing datasets and how we …
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Hi there,
I have sucessfully run genespace across 4 genomes. The output in R indicated there are 694 syntenic blocks.
_n regions (aggregated by 25 gene radius): 548
n blocks (collinear sets of …
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Hi All,
today while running the following [GTN tutorial](https://training.galaxyproject.org/training-material/topics/transcriptomics/tutorials/rna-seq-reads-to-counts/tutorial.html), we discovered …
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Hello team,
I am trying to run the following
`enriched_p = gp.enrich(gene_list=genes,
gene_sets=custom_pathways,
background=None,
…
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Hi Zuguang,
Thank you for making these genesets available. We have done similar things and used it to power our tools such as ShinyGO and iDEP. To make sure we are doing things correctly, I compared …
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I have been experiencing a runtime error attempting to run runMSEA and runMetaMSEA. The same error occurs with both. For runMSEA, I tried it with 2 different input marker_associations (which are MAGMA…