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**Current Behavior**
A clear and concise description of what is happening / what the bug is.
Normally the data for the consensus files are regularly updated, but currently there have been no cha…
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`reformat.sh` crashes snakemake if run on an empty fastq. Empty fastq can be generated from `cat` step when fastq_pass/barcodeXX directory exists and there are no fastqs within it. I assume the direct…
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## **Problem Statement**
Received an email inquiry from Jasmine Chaitram (CDC) about getting Duplicate Data from "Mpox data from commercial labs coming to CDC via ReportStream and going to Dcipher"
#…
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