-
Hi, I've used the PathML StainNormalization transform to varying success in my pipeline.
I used the macenko method to normalize images at 1000 x 1000 px tile size. However, as I reduced the tile size…
-
add install instructions for windows in the README
-
The multiplexed MIF workflow requires actively moving back and forth between raw image and phenotype plots to choose optimal phenotype thresholds and check that phenotypes match the pathologist's expe…
-
**Describe the bug**
A clear and concise description of what the bug is.
We believe this issue is similar to https://github.com/Dana-Farber-AIOS/pathml/issues/135#issue-926470357
There seems to…
-
**Is your feature request related to a problem? Please describe.**
I have large WSI data and multi-class jpeg masks, but I am so tired to find a solution to make them work with any hovernet implement…
-
I note that Deepcell provides both a segmentation (nuclear channel only) and mesmer (nuclear and cytoplasm) model (https://www.deepcell.org/predict)
Our datasets do not have a single general cytoplas…
-
### Describe the bug
Suppose the following openvswitch bridge
```
5: br-ex: mtu 1500 qdisc noqueue state UNKNOWN group default qlen 1000
link/ether 00:50:56:90:c5:eb brd ff:ff:ff:ff:ff:ff…
-
**HESlide and Slidedata only read in the top one image in .vdi file**
I use the `BioformatsReader` in `cellprofiler_core.readers.bioformats_reader` to read the ets file, which contains three images a…
-
### Describe the bug
systemctl status vmtoolsd.service does not return prompt handle after executing
### Reproduction steps
1. Launch systemctl status vmtoolsd.service on Ubuntu 64-bit Arm 22.04.3 …
-
### Describe the bug
Vcenter version : 7 or 8
Vmware tool Running, version : 12320
Vm GuestOS : Windows Server 2022
With the SAML token that I received through the STSService service …