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Currently `requirements.txt` parsing does not resolve the full dependency graph.
One option here may be to integrate `pip-audit` into this tool (though that introduces an external dependency from a…
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### Description
It seems that some packages, coin-clp is among them, don't populate `cpp_info.libs`. In the [recipe](https://github.com/conan-io/conan-center-index/blob/e50cb79d90fef64ce7f448f3f14559…
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Check docs - Seurat requires a number of python packages for various functions
Add python deps for scran?
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Maybe this is an issue on Mac, but following the directions in `setup.md` I ran:
```
pip install -r requirements.txt
```
(where `which pip` is where I'd kinda of expect it to be: `/Users/mike/…
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I depend on polylabel-rs from [geoarrow-rs](https://github.com/geoarrow/geoarrow-rs). While making updates to compile the geoarrow Python bindings for emscripten (for use in [pyodide](https://pyodide.…
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The last `python-hglib` release was over a year ago. We probably should replace it with `mercurial` or implement the required functionalities ourselves.
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Trying to install REUnet:
https://github.com/Bigsealion/REUnet/blob/master/install_REUnet.py#L23 pulls from an environment variable `nnUNet_preprocessed`? What is this for?
```
Copy /Users/johnmus…
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Sirepo expects there to be a __version__ on all configured sim types
https://github.com/radiasoft/sirepo/blob/59b71d01fd413e3e0bfb2db5776b4d83e81112f3/sirepo/simulation_db.py#L965
We are trying …
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Did the addon custom_deps stopped working since HA upgraded python to 3.12 in the 2024.2 version?
custom_deps created config/deps/lib/python3.11 and the package wasn't beeing found.
I've copied th…
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When I run `tox-current-env` tests with `--current-env` then I see many tests to fail:
```
=========================== short test summary info ============================
FAILED tests/test_integra…