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Hello,
Thank you very much for providing this exciting tool!
I am interseted in the "In silico spatial transcriptomics", which predict the gene expression from the sole H&E stain images.
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Hi
I was trying faststain on some tif images and ran into this error
```
Traceback (most recent call last):
File "C:\ProgramData\Miniconda3\envs\faststain\lib\runpy.py", line 194, in _ru…
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For digital pathology applications, color augmentation in hematoxylin & eosin space has been shown to be a useful tool (https://arxiv.org/abs/1902.06543).
Essentially, the transform disentangles a…
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Usng the PanNuke dataset with -augmentation_type heavy/brightfield_only
python train.py -data segmentation_dataset.pth --num_epochs 250 --experiment_str my_first_instanseg --requested_pixel_size 0…
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In general, **Augraphy** is trying to simplify the process of creating synthetic realistic datasets using only ground truth documents.
Often, training data is not accompanied by clean ground truth …
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After World War II, antibiotics were considered "wonder drugs", since they were easy cures for what had been intractable ailments. To learn which drug worked most effectively for which bacterial infec…
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이 문제가 정말 스캐너 색감문제라면, 아마 SA(Stain augmentation)이 효과 있을거에요.
아래의 실험 부탁드릴 수 있을까요? @wjeong53
- [x] : RandStainNA로 학습할때 augmentation을 하시구요. 확률P은 0.1~0.5정도로 임의의 float을 정하시면 될것같내요.
- [x] : 브랜치 따서 작업하시…
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**Submitting author:** @hellokayas (Sayak Chakrabarty)
**Repository:** https://github.com/souradipp76/MM-PoE
**Branch with paper.md** (empty if default branch): main
**Version:** v0.1.2
**Editor:** @f…
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Hello,
Thanks for sharing your work. I was trying to reproduce the result for PANDA on ISUP grade but the results are not so good. Can you share the slide ids you used for training and testing your…
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With a variety of models, we see that virtually stained structures show high-frequency fluctuations over time. This may be due to the sensitivity of ConvNets to small changes in local texture and orie…