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Uses: #200 #201 #202 #117
Immune receptor interactions with epitopes for use in single cell analyses.
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Thank you for your outstanding work. I prepare to use my own background in my project, and I read through your code and paper but I don not know how to do it. Can you get a reference pipeline for it?…
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I'm using commit `63aa483ec25a8f4727d1905267499ede75f524de`
When I run the example command to train PCA-SVM:
`python bin/embed_and_train_classifier.py example_files/glanville_np177_training_pati…
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Helo
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new project support image proxy Tencent TCR
version: 2.4
![image](https://github.com/goharbor/harbor/assets/42432108/241856fc-1a54-4366-be17-a1c9a197fedc)
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The TCR script creates a 14x94 matrix, which will throw an error if the dataset does not have 94 segments. Proposed fix: change `nrow=94` to `nrow=length(rownames(obj2))` https://github.com/Nanostri…
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Dear Theis Lab,
I am following your excellent repository for using TCRdist. The instructions work perfectly fine by using a subset of my TCRs however, by exceeding 10'000 clones it is suggested to …
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- [ ] Review by BS
- [x] Tessa etc output in multimodal integration way way too verbose. Silence it
- [ ] Update https://www.sc-best-practices.org/air_repertoire/ir_profiling.html#immune-receptor-se…