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Is there a minimal example of how to read a groovy file and maybe just print out the first class or method in it or something? I find it very complicated to look at the test programs provided in the r…
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# Description
Using `stage` I can stage a workflow with podman. However running the workflow with `staged-workdir offline-exec` I get the following error:
```
ERROR Workflow error:
Docker is not a…
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Today I have found the scenario where some content fetched from FTP was corrupted through the download process. There are several validation mechanisms which can be integrated into WfExS-backend:
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Cross-referencing to https://github.com/ga4gh/cloud-interop-testing/issues/111
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See [WfExS possible RO-Crate profiles](https://docs.google.com/document/d/1ALo0yQITwrzvmRPGzNqdG3zstr0XZ1FSliBjU2CNNwY/edit#) captured by @lrodrin @jmfernandez
We should gather some example output…
stain updated
2 months ago
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# Description
When running the following command: `WfExS-backend/WfExS-backend.py -L local-config.yml execute -W test-stage.yml` I got the following error message:
```
schema_salad.exceptions.Val…
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I am experimenting running WfExS (cc @jmfernandez) with Yevis/DDBJ. Here's what I did so far:
- Installed WfExS was per their docs (patched locally due to a Py3.9 issue https://github.com/inab/WfEx…
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**How much memory/cpu/disk was used in run?**
* Source entity?
* Property?
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As it is being described at https://github.com/ga4gh/tool-registry-service-schemas/pull/202 , there is an agreement about the new `trs` URL scheme, which should also be supported by WfExS-backend in o…