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BETYdb is configured to be deployed and synced across many servers, and is used by distinct projects and research programs.
The central database, betydb.org, is hosted at IGB (betydb.org; ebi-foreca…
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I'm new to all this and had a devil of a time figuring out how to access BETYdb using the PEcAn virtual machine. @dlebauer helped me out with the info I needed. It turns out there's no one place where…
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After discussion with me, @dlebauer , @robkooper , we have an updated organization strategy for geodata to better integrate with geodashboard. The current extractor code is here, deployed to a VM but …
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TODO
* [x] make sure variables are defined in [terraref BETYdb](terraref.ncsa.illinois.edu/bety/variables) (if they do not exist
* [x] upload csv files to google docs
* we can discuss formatti…
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Should be able to do complex queries that span both BETY and Clowder.
See https://opensource.ncsa.illinois.edu/jira/browse/CATS-552 and subtask https://opensource.ncsa.illinois.edu/jira/browse/CATS-3…
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After phenotypes are extracted from PlantCV pipeline, plant-level traits should be inserted into BETYdb, Traits described in [Fahlgren et al 2015](https://github.com/terraref/computing-pipeline/files/…
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- [x] Modify limit option to be more usable
- [x] Add comments to API code [used apipie; need more comments for uploading traits]
- [x] Get beta API ready for prime time, merge into master branch and …
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Add information on fertilization, date of planting, any tillage, and irrigation to BETYdb.
This can be done via the BETYdb web interface (https://terraref.ncsa.illinois.edu/bety). See documentation f…
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```
Loading required package: ncdf4
> fp ign close(fp)
>
[1] 0
2016-03-31 10:05:30 INFO [PEcAn.data.atmosphere::met.process] :
Begin Model Specific Conversion
[1] "# Convert to model format"
Wa…
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### Description
The spring planting plots are described in this [spreadsheet on google drive](https://docs.google.com/spreadsheets/d/1QQaWc0UaQQKfEtnSO1G2za8tKU2huC0_VYMBqm5CKAo/edit#gid=1066629008)
…