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On the evidence page in the rewrite, can we please create a new data table that displays the SLAPenrich evidence data?
**Example GraphQL API query**
[AKT1 and breast cancer](https://api-beta-dot-o…
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**Describe the bug**
The module "Glioblastoma Survival Prediction Index" returns an error : "No patient inside the given input directory has required scans"
**To Reproduce**
Steps to reproduce th…
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Incorrect description in the Usage : "Brain Cancer: Glioblastoma Infiltration Index (Recurrence)"
Under "REQUIREMENTS:", item 4: features.csv (this shouldn't be a requirement; the sample data doesn't…
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Follow up on #370
Hi there @d-cameron - thanks for getting back a while ago.
I have since run your recommendations and now at the somatic filtering stage.
Some samples proceeded successfully …
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Hi there,
I tried running GRIPSS with this:
```
java $JVM_OPTS $JVM_TMP_DIR -cp $GRIPSS_JAR com.hartwig.hmftools.gripss.GripssApplicationKt \
-ref_genome $REFERENCE \
-breakend_pon $GRI…
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We've identified a series of terms that are not in the cancer slim file that would benefit CIViC's use of DO.
6785 - desmoplastic small round cell tumor
0060103 - central nervous system primitive …
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#### What analysis module should be updated and why? What changes need to be made? Please provide enough detail for another participant to make the update.
- [Fusion summary](https://github.com/A…
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Documentation should refer to to "Glioblastoma Pseudo-progression Index "
The only help text included in the documentation should be: "This functionality has been removed from this CaPTk release, a…
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**Describe the bug**
I have a problem while using the skull stripping model from the DeepLearning toolbox: as soon that the model is launched, I get an exit error !=0 from DeepMedic
**To Reproduce…
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**Describe the bug**
Followed documentation on sample data and didn't get any results.
**To Reproduce**
Steps to reproduce the behavior:
1. Select the "Training Directory"
2. Select the "Outpu…