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Same labels opened with fslview (NIFTI-based) and MITKWorkBench (ITK-based):
Label=3
arr = nifti.get_data().T
vol = cortex.Volume(arr, 'S1', 'id…
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Possible conversions:
- [ ] #3
- [ ] image stack to nifti
- [ ] dicom to nifti
- [ ] nifti to dicom
- [ ] (dicom to image stack)
- [ ] (nifti to image stack)
Tasks:
- [ ] Check which …
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Quote from Slack channel:
> I found something strange. So I did again the same patient that we walked through together, after freesurfer recon and co-regist (both with MRI_ACPC), I plotted the over…
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### Description
There has been a lot of issues related to the NIfTI's qform/sform and qform_code header fields. The purpose of this issue (which is not really an issue) is to centralize all the rel…
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At least handle MINC1 files gracefully, but should I handle NIFTI?
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Dear Experts,
I intend to perform radiomics analysis on HCC.
However, when I attempt importing .nii mask/segmentation as described at https://github.com/cerr/CERR/wiki/Importing-NIfTI-data#impor…