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Hi @JoostJM @fedorov, Sorry to bother you again but this time I'm really desperate!
I was calculating all features, both from the original image and from the Wavelet filtered image and it worked fin…
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Hi,
I looked through issues thread and settings examples, and if I am not mistaken, binwidth is the parameter for intensity quantization. And the default value is 25.
So say, I have pre-processe…
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Hi guys,
I have a rather odd problem I hope someone here can solve. When I try to calculate features using the Feature extractor with default settings(almost identical script to the PyRadiomicsExam…
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I have a bunch of meshes that I would like to extract all of the shape features through pyradiomics from. I do not have image data however. I am wonder how to use the shape.py to extract features from…
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Hi everyone!
I am about to start a feature extraction on a set of images obtained from cardiac MRI.
Since I will have to deal with 3D volumes (stacks of slices), I wanted to ask:
"are there some …
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Currently, customization of the extraction is very limited in SlicerRadiomics. Moreover, Yaml parsing using PyYaml doesn't work currently on windows (see #23), which means SlicerRadiomics cannot use t…
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![image](https://user-images.githubusercontent.com/33625156/35270187-4a6f1056-0069-11e8-92f0-7cbcd65f2fa9.png)
hello sir/lady:
I installed the basic package already, but when I run the c…
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When installing SlicerRadiomics from extension manager, installation works, however, the module cannot be loaded due to an error with the pyYAML library. When you comment out `import pykwalify` in `fe…
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Dear all,
Thanks for your effort and making such a great repository. As a newbie, I wanted to know whether this package supports 2D images as well? I could not find any example in notebooks folder.…
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Profiling PyRadiomics using the brain1 testcase (256x256x25 voxels) with full-mask
- all features
- Original, LoG (sigma 1, 3 and 5), Wavelet (1 level, 8 decompositions)
Main bottlenecks:
- GLSZ…