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Hi,
I have a dataset from Philips that includes a DWI b50 isotropic image, that by dcm2niix is only partially recognized as a DWI. "BidsGuess" is correctly catching its a DWI image, however because…
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Two output tractography files are created each time, their path differing only with the addition of `algo-AFQ_` for the one with classified bundles. This way of naming does not seem to be BIDS friendl…
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Hi,
I'm getting an error when I run PyDesigner. It looks to me as if having more than one input file causes issues.
Traceback (most recent call last):
File "/usr/local/bin/pydesigner", line 1…
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### Feature description
The fitting wrapper should be able to read and write image files. This probably would look like a small wrapper of the algorithm wrapper that loads images, sends it in, conver…
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MRIQC anat
sub-NENAHC021_run-1_T1w :+1:
MRIQC func
sub-NENAHC021_task-rest_dir-AP_run-1_bold :+1:
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The dMRI image's uniformity of some data after bias correction is worse. I checked some results and found that it may be caused by the incorrect input mask. The following is an example of the image to…
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Problem: The installation works on Linux, but fails on apple silicon.
OS: Ventura 13.6.1
Hardware: Mac Studio M2
Installation
`conda create -n noddi python=3.11`
`conda activate noddi`
`pi…
dkp updated
10 months ago
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https://github.com/finnlennartsson/kpum_noddi/blob/de5c16006f5f333e5d8e41b8e5ceb15b1e51bae3/shell/dmri_preprocess.sh#L317-L318
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I can log in on Workstation with Remmina
Then I source your bashrc
```
[fjl1f15@u…
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Hi,
I have been using QSIprep to preprocess data and it is working great generally, aside from when there is severe motion. In this case (and not unexpectedly), after using eddy_cuda to perform s2v…