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I am fitting a set of ODEs to data, minimizing a cost function to do so. After I have found a parameter set I want to use profile likelihood analysis to evaluate practical identifiability. However, I…
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Hello! I've just had a look at the paper on DAGMA and it was really interesting in how you rescoped the typical continuous optimization-based approach (from NOTEARS) into something that leverages on t…
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This issue covers:
- Literature Review: Summarize the key findings and concepts from the CRM design review paper and main references.
- Methodology: Describe and justify the use of the logistic re…
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Chrome proposes developing a high-level document to capture use-cases and requirements for device attestation and other high-fidelity, low-entropy signals. This is a call for collaboration among inter…
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Currently, StructuralIdentifiability estimates the identifiability of all initial conditions and parameters. If a parameter is known, it is easy to incorporate this through
```julia
si_ode = @ODEmod…
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It seems that, at present, the algorithm isn't finding MLEs in at least some cases. We have some examples of the unweighted, unpenalized radEmu problem where we can find higher likelihood estimates of…
adw96 updated
9 months ago
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hi, I am new in the causal discovery field, and I read some recent papers in this field, like notears [1], dag-gnn [2], and I find that this code base does not support these methods, so are there any …
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Current version of tutorials describe only one way of defining a model, using the `@ODEmodel` macro. A good text about using MTK for this (and maybe even in conjunction with Catalyst) would be great t…
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Hi, I would like to make sure that what I understood of the difference between OrthoIV and DeepIV is correct/complete.
Can we say that :
DeepIV makes less restrictive assumptions on the DGP than O…
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Is it possible to include initial conditions in the equations (in some sense, these are essentially parameters, right?). E.g something like:
```julia
si_ode = @ODEmodel(
X1'(t) = p - k1*X1(t) +…