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### **Bug Reported on 8 September, 1:21 GMT +8:0 in**
Lab - Molecular Fluorescence Spectroscopy
Experiment - Familiarization with the fluorescence Instrumentation
**Type(s) of Issue -**
* Simulation …
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HelloProfessor,
What I am trying to do is separate a small DNA fragment from the binding pocket of a protein and plot the free energy path. Should I use BFEE for this purpose, considering a DNA mole…
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I have modified the test [simulation](https://github.com/openmm/openmm-torch/blob/master/tutorials/openmm-torch-nnpops.ipynb) of alanine dipeptide for a box of TIP3P water using the ANI1ccx model. I w…
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**Description**:
[https://github.com/kpolsen/SIGAME/blob/master/sigame/global_results.py#L199](url)
In the above line it seems like the diffuse phase metal mass is being added twice instead of the m…
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Consider a collection `c` of numeric objects and assume I want to retrieve the underlying scalar type. The prototypical example is `Vector{T
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I have defined a CustomNonbondedForce to calculate the non-bonding force between LIPF6 and EMC, but the original non-bonding force in the system needs to be deleted. I use nbforce.addException(i,j,0.0…
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24th Sept 2024: chair: UCL, minute taker: ErasmusMC
Will be 8 a.m. UK/5 PM Sydney - [timezones](https://www.timeanddate.com/worldclock/meetingdetails.html?year=2024&month=9&day=24&hour=7&min=0&sec=0&…
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I receive this error when running a qualification plan. Any idea what this is supposed to mean? The plot is supposed to be created from the "AllPlots"-Section of the qualificiation plan, so just re-cr…
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ATM the [Molecule](https://github.com/MolSSI/MMElemental/blob/bdb389d6abd7b38dd22dda749af66adfa949b15e/mmelemental/models/molecule/mm_molecule.py#L45) model stores atomic information for a single fra…
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@sauradeep93 we need to give them a name. Do you have a suggestion?