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**Is your feature request related to a problem? Please describe.**
Calculations of periodic surfaces require either 2D PBC or some correction scheme to eliminate Coulombic and dispersion interaction …
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Improve the check to check for exact match of the biharmonic matrix and the one obtained by allying the Laplacian matrix twice.
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From what I know one needs as many halo points on either side of the domain as the order or number pf boundary conditions.
@dhruvbhagtani2105 you haven’t done that but argued that your formulation…
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Hey,
I'm currently starting my PhD project and am setting up a simulation starting from the cluster.in environment. I've slightly modified the default set up so that I start with a perturbed densit…
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Hi all,
I'm running a 2D simulation using this PICMI input
```python
import numpy as np
from math import sqrt, ceil, floor
from pywarpx import callbacks, fields, libwarpx, particle_containers…
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## Rationale
The GrainTracker doesn't work when using DistributedMesh if the simulation also contains Periodic BCs. The issue comes from the fact that the GrainTracker never expects to deal with …
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Right the user is able to define the world in the config file.
Symmetries can be used there. For example mirror symmetries.
The issue is that the symmetries might differ for different things to …
lmh91 updated
2 years ago
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Hi. I use JAX-MD to build a neighbor list, and find some particles that have no neighbors:
(we have 2988 particles in PDB file)
```
DeviceArray([2988, 2988, 2988, 2988, 2988, 2988, 2988, 2988, 2988…
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Examples 4, 5, and 6 to be exact.