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Hello everyone, I am a Computer science college student and new to radiomics and medical science.
I want to build a radiomics feature-based classifier. I have to take CT scans Dicom images.
Firstl…
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Hi @ashokrajaraman @leofountain ,
I tried running Weaver's example code again, nevertheless the "segmentation fault" error still persists. Below are the outputs of the command:
-- Weaver PLOIDY
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xtYao updated
7 years ago
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Hi!
I'm wondering how to use the new GATK4 copy number segmentation as input to TITAN. I guess it should be possible (see eg. https://software.broadinstitute.org/gatk/documentation/article?id=11088…
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The purpose of this issue is to track the progress related to the migration of the datasets historically associated with the server `http://insight-journal.org/midas`
The associated MIDAS communiti…
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**Is your feature request related to a problem? Please describe.**
Currently, we developed many bundles in the `model-zoo` repo and developed the `ConfigParser` to load configs.
But actually we don'…
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in your brats 2022 notebook you report that you trained 5 models for 150 epochs and averaged their predictions
can i know what was the range of Val loss and train loss at the end of each fold?
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Dear MutSig2CV team,
Even setting params.txt not to remove duplicate patients, my execution is doing that anyways.
--------------------
MUTSIG_VERSION = …
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Hi
Dear Dominik
The network test code has been tested as below just on 3 sample case from kits:
**from miscnn import *
# Create a Data I/O interface for kidney tumor CT scans in NIfTI format
fr…
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Hi
I've noticed that the majority of my samples (WES, ~60-250x) are being predicted to have ploidy=2.00, purity=NA. I understand that this can happen when there's a lack of copy numbers but my sample…
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We would need to migrate the [Registration case library](https://www.slicer.org/wiki/Documentation/Nightly/Registration/RegistrationLibrary) to more modern, sustainable infrastructure, such as Github …