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I was talking to @ajduberstein and we agreed that the [Viv project](https://github.com/hms-dbmi/viv) and the corresponding [avivator viewer](http://avivator.gehlenborglab.org/?image_url=https://viv-de…
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## Goal
@lauraclarke and @mshadbolt are giving a presentation to the DCP about the EMBL-EBI archival resources and their goals
The topics covered by this presentation should include
- info ab…
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Before we start updating DRAO, we need to update the member ontologies and ensure there are no resulting conflicts. This ticket covers that update.
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Two things came up recently that could be integrated into the data cube extension:
1. Add variables in addition to dimensions. Some data cubes expose variables, some don't. We don't need this for …
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## 🐛 Bug
When napari is made to open a SPE (https://imageio.readthedocs.io/en/stable/format_spe.html#spe) time series file, which e.g. imageio.volread reads as a proper 3d array (t, y, x), only the…
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I still have some cleaning up for the August release as well as getting the configuration of modules with a conda installation working, so the commit for the release will be next week (probably Wednes…
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Steps to reproduce:
1. Navigate to [Resource Index](http://bioportal.bioontology.org/resource_index) page in BioPortal.
2. Type any class name in the "Search biomedical resources" search box at th…
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Zarr is ideal for operating on data with multiple reads and writes, but doesn't perfectly support visualization of massive datasets. This task usually requires some form of octree or image pyramid.
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https://github.com/NEUBIAS/bise/tree/dev20191022newTheme
has been deployed test.biii.eu. It will be deployed in its actual state on dev branch, then if functional on prod, to start fresh again with…