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According to @evaalonsoortiz, the GRE scans in sub-NYU1 are from another project. The GRE scans in sub-NYU1 on the OpenNeuro database must thus be replaced with the correct scans from this project.
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I'm working with your level_4 container (thanks for setting this up!) trying to use SPM without matlab. In the Dockerfile you set several environment variables, but when I run the container not all of…
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First off, thank you very much for providing this tool as an open-source solution.
I am a radiologist and must admit that i have little programming knowledge regarding python. Thats why i am strugge…
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Hi,
thanks for the great toolbox!
Is it possible to set up a cone beam half-fan projector, such as is used by Varian's TrueBeam CBCT? Here's a [figure](http://cdn.iopscience.com/images/0031-9155/52/…
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For gradient systems with significant non-linearities (e.g. connectome scanner, some 7T head-only systems), it is important to account for these as they not only lead to spatial distortion, but also s…
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## Context
When running [dcm2niix](https://github.com/rordenlab/dcm2niix) with RF mapping `DICOM` (acquired with a turbo flash sequence on a 7T Siemens Magneton Terra), it only outputs one `NIfTI` …
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Hi!
Regarding the ADC mask for ProstateX-0142:
Finding3 (ProstateX-0142-Finding3-ep2d_diff_tra_DYNDIST_ADC0_ROI.nii) geometry does not correspond to Finding1, Finding2 or the DICOM file:
- Findin…
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currently, functions such as path.is_file() are passing on local machines but failing on GitHub.
there is potentially a previous solution to this problem that relies on hash functions
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Hey there,
I was thrilled to finally find a tool that would convert NIfTI to DICOM, including segmentations. But unfortunately, MR is an unknown modality at the moment. I was wondering if you plan …
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https://praxisinstitute.org wants to fund a Canada-wide spine scan sharing platform.
They were considering paying [OBI](https://braininstitute.ca/research-data-sharing/brain-code) as a vendor, and …