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---
id: smoldyn
version: "2.68"
specificationsUrl: https://raw.githubusercontent.com/ssandrews/Smoldyn/167a1700057dffedaf47a22f717c56d09f1113d8/biosimulators.json
specificationsPatch:
version: "2.68…
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---
id: vcell
version: 7.4.0.83
specificationsUrl: https://github.com/virtualcell/vcell/releases/download/7.4.0.83/biosimulators.json
specificationsPatch:
version: 7.4.0.83
image:
url: ghcr.io…
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When running any of the examples that put Jax into 64-bit mode e.g. the lotka_volterra benchmark, produces the following error, when using Python 3.9, jax 0.2.27, jaxlib 0.1.75, equinox 0.1.5, on a Wi…
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## Bug summary
Made two backup runs with
rdiff-backup.exe -v0 --force backup --exclude C:/Users/user/AppData --exclude C:/Users/user/Downloads C:/Users/user B:/rdiff
which stopped with the er…
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---
id: vcell
version: 7.4.0.39
specificationsUrl: https://github.com/virtualcell/vcell/releases/download/7.4.0.39/biosimulators.json
specificationsPatch:
version: 7.4.0.39
image:
url: ghcr.io…
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---
id: copasi
version: 4.35.258
specificationsUrl: https://raw.githubusercontent.com/biosimulators/Biosimulators_COPASI/37ac0ac28ccf454527a58c32f8e9efed1de3bc5f/biosimulators.json
specificationsPatch…
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It seems that the document "test/applications/partial_lotka_volterra.jl" is outdated and not compatible with version 0.6 now. Thank you!
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---
id: vcell
version: 7.4.0.46
specificationsUrl: https://github.com/virtualcell/vcell/releases/download/7.4.0.46/biosimulators.json
specificationsPatch:
version: 7.4.0.46
image:
url: ghcr.io…
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I was testing the web export feature with one of the examples. I used the Lotka-Volterra one. When I run it as a script I get the same result as the [one](https://vedo.embl.es/images/simulations/volt…
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In `integration_approximation.jl` I have implemented the way SPM12 handles linearization of the right hand side of an ODE and numerical approximation of the solution of a non-linear ODE.
Testing on a…