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Hi,
When I tried to run HDL with your test data, I met error like this " HDL: High-definition likelihood inference of genetic correlations and heritabilities (HDL)
Version 1.3.8 (2020-07-12) install…
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Hello,
Is it possible to color specified peaks (ex. novel loci) in a different color in topr manhattanplot? For example, I have 8 novel loci detected in a meta-analysis and would like to highlight t…
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Hi Zhili,
I tried to run SBayesRC with my own summary statistics and the Eur_HM3_UKBB LD reference provided by you:
Rscript -e "SBayesRC::impute(mafile='${out_prefix}_tidy.ma', LDdir='$ld_folder'…
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We want to show FinnGen release 9 metaresults for FG + UKBB. Can you @juhaa point to the imported data if still exists?
URL should be
https://public-metaresults-est-ukbb.finngen.fi/
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Hi Oliver,
I apologize for reaching out again, but I've encountered an issue with script execution while working on this specific gene. Could you please provide some guidance on how to resolve it? …
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Dear Florian,
I have made a lot of progress thanks to your helpful responses to my questions in the past few weeks and I highly appreciate that. I am trying to calculate the genetic correlation betw…
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### Problem
When trying to segment images with a 1-channel model
```
python predict.py --nnunet_folder nnunet_folder --prediction_folder pred_folder --dataset_name gnc --num_channels 1
```
this r…
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Hi,
When I run the last step of the code using the following line, I get an AttributeError:
I have created a virtual environment with python 3.9.6 and the packages in requirements.txt. All the n…
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When I submit the following:
nextflow-23.04.2-all run pgsc_calc/main.nf -profile singularity --input ./samplesheet.csv --scorefile PGS_scores/*.txt.gz --target_build GRCh37 --ref pgsc_calc_ref.sqla…
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Look into why finding doubleton pairs failed to find sample dups/twins