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Hi,
Is it possible to run integrated analysis similar to https://satijalab.org/seurat/v3.0/immune_alignment.html on scATAC seq data? Please see my attempt below with the error produced. I followed …
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- Repository: https://github.com/elolab/ILoReg
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j0ntt updated
4 years ago
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- Repository: https://github.com/theislab/zellkonverter
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Hello,
I am doing an integrated analysis of scRNA-seq and scATAC-seq. I am getting the following error at the `FindTransferAnchors` step. Here is the detailed error:
```
Error in if (length(x …
kpadm updated
4 years ago
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`[9d/de566e] process > bbknn:BBKNN:BEC_BBKNN:SC__SCANPY__DIM_REDUCTION__UMAP (1) [100%] 1 of 1 ✔
[a9/07df14] process > bbknn:BBKNN:BEC_BBKNN:SC__PUBLISH_H5AD (1) …
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- Repository: https://github.com/ebecht/infinityFlow
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- Repository: https://github.com/kevinblighe/scDataviz
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- Repository: https://github.com/LTLA/scuttle
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I have a problem in which I am trying to use the zinbwave package for differential expression analysis from snRNAseq data, but I cannot get the necessary observational weights.
I am using: R versio…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/SydneyBioX/CiteFuse
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