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.pem certification works for EC2 adaptor, but the stops/hangs at a trigger request by the VM by the SSH adaptor. Debug log below:
```
(sagabjenv-test188-1)anjani@anjani-VirtualBox:~/bigjob_test/test_…
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Hi,
I am using the same bash code that worked for me in the past with zUMIs. However, now I am not getting the dgcounts.rds files, although I got a 'Successfully completed' message.
When looked de…
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Hi,
The error **bash: /zUMIs-noslurm.sh: No such file or directory** is displayed when I run the test:
p=`/path/to/zUMIs/`
/SOFTWARES/zUMIs$ bash $p/zUMIs-master.sh -r $p/ExampleData/cDNAread_HEK…
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Hi,
I am trying to run the sample data in zUMIs but I got an unsolvable error. Would you please check this for me? Thank you so much.
Yours,
Yi
`unix305 532 % p='/stornext/General/data/use…
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Hi!
We got a similar issue as the open one. However, we only have the following error/problem whenever we include the hamming binning based on barcodes or UMIs.
We used the most recent zUMIs vers…
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I am opening this because of this [ticket](https://github.com/radical-collaboration/CyberManufacturing/issues/43)
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Tasks:
* [x] Grant access to Globus endpoint
* [x] Grant access to Bridges project
* [x] Get bin2tif components installed on Bridges, ideally via Singularity
* [x] Setup HTCondor VM/EL7
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```
2017-03-15 17:56:26,034: agent_0 : MainProcess : DVMWatcher : DEBUG : dvm output: --------------------------------------------------------------------------
…
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Hi, I have scRNAseq data with cell barcode and UMI in the Barcode read and and an additional plate barcode at the end of the cDNA read. I can extract the plate barcode from the cDNA read in a preproce…
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I am trying to run the [amazon_ec2](https://github.com/radical-cybertools/saga-python/blob/devel/examples/resource/amazon_ec2.py) script (again!), but I get an error indicating that SAGA cannot detect…