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I just ran:
```
ms bio create help
```
and I now have a biochemistry called 'help'.
The closest thing I can find to a delete/remove function is Store::delete_data() is this what I should use to re…
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I frequently wrote scripts for specific circumstances that used the MS code, to the point at which I kept my own little library that frequently called the same Model objects and ran the same functions…
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Can you confirm for me what the different fields are for in AliasSet, they may be self-evident but put together there's room for ambiguity:
name
source
attribute
class
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I thought this used to work, but I'm no longer certain. The problem with this:
```
bash-3.2$ ms stores rm local
bash-3.2$ ms stores add local --type file
bash-3.2$ ms list biochemistry
biochemistry…
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Running the 'ms createuser' command creates a bad password in the .modelseed config file. Trying to login as the user will then fail because of an 'invalid password'.
I believe this has to do with th…
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Programmatically, I keep a bunch of status messages for various things that I do to the compounds and reactions, these include whether or not they have a mol file, if the mol file was successfully cha…
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Programmatically, I keep a bunch of status messages for various things that I do to the compounds and reactions, these include whether or not they have a mol file, if the mol file was successfully cha…
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I've started receiving this error on my main VM (running Arch Linux) when I run the ms import biochemistry command:
```
Can't call method "can" on an undefined value at /home/paul/local/lib/perl5/JSO…
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Here's the error message:
fbasingleko -model "iJR904.16242"
ModelDriver encountered an unrecoverable error:
""Could not load results for combination knockout study"" at /lustre/beagle/fangfang/Mode…
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[jplfaria@biologin-4 bin]$ ./fbacheckgrowth -model iJR904
Creating the model file: /vol/model-dev/MODEL_DEV_DB/ReactionDB/MFAToolkitOutputFiles/2400322/iJR904.tbl
Creating biochemistry provenance fi…