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In Mesquite, when exporting a nucleotide file, and exception is thrown if there are uncertain cells in the matrix (e.g. R =A/G). Should be able to export these without complaint using the ambiguity co…
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If you need this, please :+1: this issue with a brief use case
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## Phylo code review - 20th April 2014
### General notes
Overall very good, and a great start for the Bio.jl phylo module. Here I have attempted to map out what would be required to get to a version …
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Sign up here for HOWTO doc updates. So far:
@bosborne : Beginners, SearchIO, SeqIO,~~Restriction_Enzyme_Analysis~~
@pcantalupo : ~~BlastPlus~~, ~~Writing_BioPerl_Tests~~, ~~Getting_Genomic_Sequences…
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@pmabee suggests on the About the KB page.
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Thank you for your platform to support the use of DendroPy.
I installed a software called CheckM . And DendroPy was also installed. But seems there are some errors. The details are as follows:
**[ro…
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Allow the user to export the tree in at least 1 way, such as email or send to browser.
arlin updated
8 years ago
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Here's the log:
``` R
> nexml_validate("./inst/examples/test_original.xml")
[1] FALSE
Warning message:
In nexml_validate("./inst/examples/test_original.xml") :
Validation failed, error messages:
…
hlapp updated
8 years ago
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The NeXML matrix returned by the [API method for obtaining the matrix for a study](http://docs.phenoscapekb.apiary.io/#reference/studies/data-matrix-for-study) may contain non-unique labels. While NeX…
hlapp updated
8 years ago