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Hi getzlab team,
I ran the MutSigCV2 for the hg38 samples with the following command:
`bin/MutSig2CV ${MAF_FILE} ${OUTPUT_DIR} params.txt
`
The params.txt follows the [default params for hg3…
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Hi,
Is it possible to use SHAP with XGBSEKaplanTree or bootstrapestimator.
SHAP treeexplainer is not working with them. Permutationexplainer seems to start evaluating but ended up with error "Value…
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Hello Thang.
I've noticed that the output of the final file (post-rollup) contains the same protein in multiple permutations.
_Example
P28661;P28661-3
P28661;P28661-2;P28661-4
P28661;P28661-2…
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Hi,
Thank you for creating this tool! I'm thinking about how to integrate this into some analyses/tools that we are currently using and I want to make sure I'm thinking about using pTFCE the correc…
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If I only have the SPI display uncommented in the board.env file, the SPI display works fine. If I attempt to uncomment an additional overlay for use with my Portable Input Shaper, the SPI screen just…
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I've not coded on a C64 6502/6510 for almost 30+ years, since the Compunet days....and when reading up on this extension coupled with Kick Assembler and Visual Studio I've decided to try and take up c…
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hello! I was trying to do the tutorial but I encounter this error that prevents me to generate plots.
`ModuleNotFoundError Traceback (most recent call last)
in ()
5 …
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### Background -
In MITM-RF we build a hash table for LHS permutations in advance. later we search for hits in this LHS hash table when enumerating over RHS permutations.
currently the LHS is built…
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First of all, great job on the paper, this visualization page and also the source code!
I was playing around with your interactive visualization of the CartPole task and I don't really understand w…
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Thank you for the fantastic work on BROCCOLI. I am still new at this toolbox and migrating from fsl's Feat.
I am able to run `FirstLevelAnalysis` but I cannot get the permutations to work. Every t…