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Hello,
Do you consider adding binary alignement / models ?
Thanks,
Adrien
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@nspope had a great idea for a tsinfer-like method to identify mispolarised ancestral states. This could form the basis of a comprehensive recombination-aware ancestral state polariser. Note that exis…
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This tutorial and the original paper have mentioned the polarized SNPs. Some other literature implied that the polarization or not may result in the different SFS, and thus overall present somewhat di…
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When debugging some problems with haplotypes that include the centromere (https://github.com/tskit-dev/tsinfer/issues/420) @awohns and I needed to find out which ancestral haplotypes were failing, whi…
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Trajectory Consistency Distillation needs a confyui native TCDScheduler
https://github.com/jabir-zheng/TCD
https://huggingface.co/h1t/TCD-SDXL-LoRA
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It struck me that we have several different routes for improving dating: some are to do with simply improving the topologies, some to do with the tsdate algorithm, etc. It would be very useful to know…
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Hi, I'm an undergraduate researcher in UW and I'm quite interested about how to construct the "optimal sequence" for each year based on the historical data "H3N2_HA1_all_years_filtered.fasta", which i…
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### Is there an existing issue for this?
- [X] I have searched the existing issues and checked the recent builds/commits
### What would your feature do ?
Currently Trajectory consistency distillati…
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(Can probably start doing that here in the root-level README.md)
rvosa updated
8 years ago
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At the moment if you do `help(tsinfer.VariantData)`, you get the correct Initi signature described, but the rest of the docstring is wrong (is uses the one for SampleData):
```python
Init signatur…