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Building off of #7 and our recent discussions, I thought we could make a list here of possible ways to summarize the final output from PhyloAcc. A good starting point can be @xyz111131's original mark…
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### Errors when I use predict and predict_probability
### My environment
* pgmpy 0.1.6
* Python 3.6
* Ubuntu 18.04
### predict function error
When fed the BayesianModel little evidence, th…
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Dunstan et al in [Easy computation of the Bayes factor to fully quantify Occam’s razor in least-squares fitting and to guide actions](https://www.nature.com/articles/s41598-021-04694-7) present "an ea…
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Hello!
I calculated a correlation matrix:
`cor_BF_fit_EGpos_all
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I was going through the examples to calculte Bayes Factors (BF) for model comparison. It all works out and is neatly described, but I was wondering, why 'Species' is modeled as a fixed effect predicto…
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- [ ] Improve model swap acceptance for the 'All' cases
In general, model swap acceptance ratios are lower for 'All' cases than they are for 'rhol+psat' cases. We should look at using better Q pro…
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When estimating the effect of a categorical variable, such as in, for example, an ANOVA, `bain` by default drops the intercept. This seems like a logical decision, but results in seemingly unexpected …
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Hello,
I am interested to try selbal on my dataset. However, when I run selbal.cv() using only y on one dichotomous variable, I have the following error at step 1:
````task 1 failed - "Response an…
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### Issue description
Only with `method = "bayes"` we can set the number of maximal allowed parents individually per node.
### MRE
```
### Generate data
# Set seed for reproducibility
set.s…
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