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Change the reading of maps from qFit infrastructure to CCTBX.
The two main functions to be converted are:
fromfile()
canonical_unit_cell()
This will include storing information about the space…
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Hi, I have some problems during particle extraction.
In the beginning, I was able to extract particles from several images with the error" No handlers could be found for logger "mrcz.test_mrcz" . I …
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The PISA result for 4bhn is tetramer. However in PISA EBI a dimer is given as prediction whilst using jsPISA from ccp4, there's no stable assemblies at all (i.e. monomer)
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If the full path of the images has one space DUI is incapable to import
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Aim: Run validation code* at least at every code change/ daily.
Validation code:
Minimal:
- Validation of a single dataset that the minima is within 2 step distance (i.e 0.02, with 0.01 step) w…
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As discussed more than one year ago in http://phenix-online.org/pipermail/cctbxbb/2015-December/001181.html, `phenix.map_value_at_point` (or `eight_point_interpolation` in `maptbx`) does not work wit…
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Looks like we can use `pyparsing` to parse the S-expressions when implementing the text formatted module parser.
https://webassembly.github.io/spec/core/bikeshed/index.html#text-format%E2%91%A0
…
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## System information
- PyJob version: 0.3.1
- Python version: ccp4-python
- Environment (if applicable):
## Problem description
The PATH variable is no longer passed through the -V op…
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How can I tell the `configure` command where to find mmdb2?
About the system:
============
```
$ lsb_release -d
Description: Oracle Linux Server release 8.7
$ uname -r
4.18.0-425.19.2.el8_…
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