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Nlx has:
'apical/basal', bipolar, bitufted, multipolar, other, stellate, 'this is a columnar cell without a true dendrite', unipolar
Other than 'other' and the chatty text these should map to short…
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I used analysis 19 beta to find spots close to filaments and it worked well picking up the spots but the distances for some spots were off. I tried using the updated analysis 24_beta but the spots clo…
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General shape terms are not specific enough. e.g. for pyramidal neurons, the shape refers to the soma, not the whole cell, and their are other attributes - such as the number an location of projectio…
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rdfs:label "cell morphology"
definition "A quality of a single cell inhering in the bearer by virtue of the bearer's size or shape or structure."
rdfs:comment "Use this term for morphologies that ca…
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Potentially very useful. Not sure why we don't have it yet... Maybe too many? Probably make sense to activate once we have a proper UI for the filters.
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CC: @hattrill @vanaukenk
The following terms were requested on TG for use in annotating the paper in this annotation consistency exercise:
http://wiki.geneontology.org/index.php/Annotation_Conf._Ca…
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While annotating PMID:24487234, I have come across Figure 1 (i-k), which shows that mice lacking Cx3cr1 contain significantly fewer multisynapse boutons (MSBs) than wild-type mice. The authors also di…
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I have come across the term 'synaptic multiplicity', while annotating PMID:24487234, which shows that mice lacking Cx3cr1 contain significantly fewer multisynapse boutons (MSBs) than wild-type mice, w…
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The term abnormal dendritic spine morphology (MP:0009936) has over 100 annotations so we should consider creating child terms for this term:
- abnormal dendritic spine density
increased
decreased…
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I would like to see "dendritic spine cytoplasm” added to the GO ontology under the part_of parent term "dendritic spine” (GO:0043197) and the is_a parent term “cytoplasm” (GO:0005737). The definition…