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There are two log files produced by the macro. One is Fiji's realtime log of everything it is doing and is not saved automatically. After the macro stops running, this log file can be saved manually.…
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Hello ImageJ and Fiji-team,
it seems that in a recent update of Fiji some options are reset when Fiji is closed. We saw this as several macro were not working any more. Ping @Christian_Tischer.
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Hello,
I installed ColorDepthMIP_Generator following the instructions. The macro 'Color Depth MIP batch 0315 2019' ran without reporting an error (see log below). However, nothing was generated af…
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Does Fiji have an equivalent function to the macro function `setBatchMode(true);`? I find that things like rearranging images (like Fiji does upon loading an image) is much faster with it on.
That sa…
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Hi,
I have been creating a macro to analyze the intensity along regions of interest, in which I use "skeletonize" + "geodesic diameter" to select the longest path through the ROI (and then add this…
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In the good old Fiji days, when the editor was not extensible at all, we had a command for the script editor to install macros (as opposed to running them) via `Run>Install Macro`. Let's add this back…
dscho updated
8 years ago
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As [discussed on IRC](http://code.imagej.net/chatlogs/imagejdev?times=prefix&start-date=2013-03-15&end-date=2013-03-15#20130315T163800), we should have a way for users to define macros or scripts to r…
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Pat Coyle reports that the output files from the Fiji macro do not have EXIF data even when the input files did have EXIF data.
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Hi!
Have you ever use EDF in fiji macros? I cannot run it using run("Easy mode..."); it just open the GUI page. Do you know how to solve that problem? Thanks!
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I tried to use https://github.com/JaneliaSciComp/ColorMIP_Mask_Search/tree/master/ColorDepthMIP_Generator
to generate a MIP image from an 8-bit JFRC2010 registered stack. But not long after I start…
mmc46 updated
6 years ago