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How to solve the problem as i has followed the changes in Tensorflow 2.0 compatibility #1896 but still come out these errors
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I couldn't locate the data augmentation preprocessing mentioned in the paper's algorithm, specifically in Algorithm 2, which is designed to take ground truth samples as input and generate augmented sa…
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Dear Authors,
We'd like to add "GITA: Graph to Visual and Textual Integration for Vision-Language Graph Reasoning" to this repository, which has been accepted by NeurIPS 2024. [**Paper**](https:/…
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Hi! I found that the augmentation "add edge" may not support for the mini-batch graph-level contrastive learning. In my understanding, edges should be added for each graph in the mini-batch case. Coul…
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Hello @KiddoZhu ,
I tried node2vec on a graph with 685,551 nodes using 2 GPU cards with 32 GB each and CPU memory size 120GB, but I kept getting out of memory errors. I was doing p = q = 1. When I…
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Hi,
I tried to run this repo with different datasets, however it has difficulties to load .npz file. My guess the cora_ml dataset is preporeccced data, It only contains one big graph. The publicly …
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I m planning to use vg to call snps for A. thaliana (more then 1200 samples).
I understand for such projects I need to use toil-vg call ( because augmentation and call does not scale up for such …
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my TensorFlow-gpu is 15.0
oduleNotFoundError Traceback (most recent call last)
/opt/conda/lib/python3.6/site-packages/keras/callbacks.py in __init__(self, log_dir, histogra…
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Hello,
I have been trying to link detections using a MAGIK model trained on simulations, and I'm having issues getting any reasonable trajectories from real data. I have attached my train.py and t…
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I would like to be able to chunk a graph, modify the chunks (e.g augmenting with variants in the "middle" of the chunk) and combine them back together.
I think `vg combine` works with disjoined chu…