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Discussion thread for community detection functions driven by `igraph`.
Questions to ponder:
- Which community detection/extraction methods should we focus on first?
- What are the tuning param…
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There are two functions to get the endpoints of edges:
```c
igraph_error_t igraph_edges(const igraph_t *graph, igraph_es_t eids, igraph_vector_int_t *edges);
```
```c
igraph_error_t igraph_ge…
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I'm running C-igraph version 0.7.1 on Ubuntu, but there's a newer version on the Mac where `igraph_neighborhood` has 6 arguments instead of 5. This was changed by the developers in 2014. It seems th…
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**What is the feature or improvement you would like to see?**
Many igraph functions support ignoring edge directions in directed graphs. Some of these functions only work on simple graphs or use mo…
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Hi there, could you please offer a requirements.txt to show the required version of python, networkx, igraph? I cannot run the code using the up-to-date libraries. There might be some version unmatchi…
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### Please make sure these conditions are met
- [X] I have checked that this issue has not already been reported.
- [X] I have confirmed this bug exists on the latest version of scanpy.
- [X] (option…
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correct install should be shared
[https://github.com/igraph/python-igraph/issues/134](url)
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I would like to investigate the dm package as a recommendation for our group as an intermediate solution to multi-table handling that can be extended to a more thorough solution. However, I have to wa…
mlell updated
7 months ago
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Hi guys! I tried to run the whole bollito pipeline and it crashes in the `seurat_find_clusters` rule because of the version of the `igraph` package. The error I get is:
_"CONFIGURATION STEP
Error:…
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Hi,
I'm trying to install the MicrobiomeAnalyst package in my laptop and after a lot of warnings I get an error
```
package or namespace load failed for ‘MicrobiomeAnalystR’ in namespaceExport(n…