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In NLM denoising, the parameter `h` controls the smoothness in the final image. While skimage implementation requires a scalar for `h` several articles chose to adapt it locally based on local varianc…
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For some microscope modalities one collects 2D images, but it can make sense to still assign them a physical thickness along axis perpendicular to the 2D plane, e.g the axial extend of the PSF in ligh…
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### Describe the Bug
Seems like we don't have support for TID1500, Here is the sample data from the dcmqi
https://www.dropbox.com/s/k6bdq4tt6itbcfp/Archive.zip?dl=0
### Steps to Reprod…
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I concurrently use Spyro and Devito tools to process the most simple velocity model. In Spyro, I obtained minimal data values in true_d.data, as shown below:
```
array([[0.00000000e+00, 0.00000000e+…
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Right now 20mm is hardcoded. For backwards compatability between CIVET 1.1.12 and 1.1.10, we need to specify rms 28.28 because of the off by sqrt(2) bug in CIVET
See http://www.bic.mni.mcgill.ca/pipe…
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Hi Fabian,
I'm a PhD student in Simone Mattei's team at the EMBL Imaging Centre.
Zhengyi and I have made a change to our workflow, and we would like to discuss it with you:
We have commente…
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Hi,
When I try to use the function, PTKSaveAs, to save the data, it always shows that Undefined function or variable 'PTKSaveAs'. Even when I try to do doc PTKSaveAs, it always shows that No results …
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Lead developers: Julien+Michael
The idea of this roadmap issue is to increase the quality of the data **during the import**, with a kind of **quality control** for imported data, maybe during the imp…
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I just got a long list of what should be done for ODIN.
It has requirements for all software stacks not only data-reduction so we should cherry-pick relevant requirements for imaging.
It also has re…
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**Is your feature request related to a problem? Please describe.**
Series selection can be very complex and often needs to be customized for a specific application use, and for specific modality. DIC…