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In some sense, an IPython/Jupyter notebook is Recipy's biggest competition, although the problems addressed are slightly different.
Related to #65.
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In the text we often refer to Jupyter notebooks as Ipython notebooks. Thoughts on whether this should change?
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I installed pandas since I didn't have it previously, as well as the other packages from the preliminary set up steps.
``` python
sudo apt-get install python-pandas
```
I was able to reproduce the i…
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We do have the option to run nbconvert on the Galaxy server, but might be nicer to use a JS library to render notebooks. Could use https://github.com/jsvine/notebookjs for instance.
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When i run train.py it gives me this error.
---------------------------------------------------------------------------
FileNotFoundError Traceback (most recent call last)
…
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Might be useful to have a notebook as well as a shell. Could use the same kernel.
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See the logs of our buildbot http://buildbot.shogun-toolbox.org/builders/nightly_default
Search for "error |"
After this, add a github hook, so that buildbot runs notebooks and reports back to g…
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- Explain HMM basics
- Illustrative examples
- A real world application (we have a static example somewhere that is about fitting sequences of weighted dice rolls)
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I made this graphically improved ipython notebook designed to illustrate the efficiency of the neuronunit optimization:
https://github.com/russelljjarvis/neuronunit/blob/results/neuronunit/unit_test/…