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i) Create a separate neurodata type for OpticChannels, rather than them being a special thing generated by the ImagingPlane table
This will give the ability to reuse the same optic channels across …
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Hi,
I am trying the mpiexec python script for Windows and are wondering if you would be able to provide an updated parastitcher pyc file to be compatible with python3.7 and 3.7.1.
Thank you for the…
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Please add a data table to the repo that includes the abundance, count, read data for Trichodesmium (any species), Noctiluca scintillans & any Chatonella, Heterosigma and Pseudochattonella species (fi…
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### dask-image example datasets
We need some good example data for tutorials with dask-image.
This issue is a place for discussion and suggestions. If you have links, add them here!
Ideally th…
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At the moment, Paintera is really hard to use for first-time users, we need to improve documentation, including (but not limited to):
- [x] Usage example and better documentation for `paintera-con…
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Hi @thewtex, I couldn't leave this on your branch, so am putting it here. First thing to say is that I'm very excited about this and getting another update during the Zarr meeting the other day was gr…
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There are bits of code around for adding a fluorescence filter cube for epifluorescence imaging. However, this is not documented in the assembly instructions (because it's probably too confusing). I…
rwb27 updated
5 years ago
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## Problem
The `getChannelGroup` is great. However, there is no equivalent for objectives. This is problematic because as far as I can tell the recommended approach to config groups is to have one …
ianhi updated
3 weeks ago
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The topic of having an interactive image viewer that is usable as a widget in the Jupyter Notebook has come up a few times recently both IRL and on GitHub ( most notably issue https://github.com/dask/…
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Volumetric visualization works if you pass an `Array`, but if you want to visualize a subregion then one might think that `view(vol, 100:300, ....)` should work. If the failure here isn't deliberate, …