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Configuration file: db_main.toml
Description: miRDB is an online database for miRNA target prediction and functional annotations.
```toml
[db_mirdb]
source_url = "http://mirdb.org/download/miRDB…
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Hello dear Fabricio,
I am using Bionero for the first time to infer a GRN. My data is from a non-model organism, whose RNA-seq samples I assembled with Trinity and predicted the TFs with iTAK.
I a…
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**Note that there are multiple terms to review, so multiple spreadsheets**
**GO:0030817 regulation of cAMP biosynthetic process**
DONE https://docs.google.com/spreadsheets/d/16bL-BHUIoljKbcuCwDdG…
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**What is the SO term name and accession?**
SO:0001877 lncRNA
non-coding RNA generally longer than 200 nucleotides that cannot be classified as any other ncRNA subtype.
**Describe what you …
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While checking fixes of other ticket ( #260 ) I noticed that somehow the Creators (what we call authors) are abit messed up in some of our datasets?
for example:
https://datamed.org/display-item.php…
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re-upload and test all the alvis components
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#### Current behavior:
60 genes are discovered to be uncorrelated with their corresponding reactions in `Purine metabolism`
| Gene | UniProtID | Reaction | GPR| Correlation | Manually chec…
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https://mp.weixin.qq.com/s/P880vYXhzCKen9dwUgEW7g
ixxmu updated
3 months ago
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~Related to https://github.com/biothings/biothings_explorer/issues/880?~ Doesn't seem to be...
Noticing multiple cases in 10/20 automated test run, where edge-attributes were duplicated.
## Exa…
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I have been using this package for the last year and have had no issues executing the "predicted" command allowing to search multiple putative miRNA target databases at once. However, recently I can n…