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## Description
Currently Webknossos annotations are in the `*.wkw` format. We should create scripts to export and convert these annotations to either OME-Zarr or NIfTI-Zarr. We have decided to se…
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### Related problem
Certain unused Nifti header fields can sometimes be overwritten by a tool somewhere in the pipeline.
For example, the TR value can be stored in `pixdim4` and then overwritten wit…
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I load the nifti-1 file using nifti-reader-js and get the header of the nifti. Now i am trying to change the orientation of the image like RAS to LAS or LPS and show it to canvas. How to do it after r…
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Prior to the release on EBRAINS:
- [x] Store niftis at the data-proxy/temp
- [x] Convert niftis to neuroglancer/precomputed and store at the data-proxy
- [x] Update configurations of prerelase Juli…
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Hi, thank you for this great implementation! I tried loading RGB24 (fused axial PET/CT) images using cornerstone-nifti-loader, but apparently the current loading mechanics do not support this image ty…
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Hi,
Does the current version of Neuroglancer support NIfTI file format? If so, do you have a working example on how to specify source url and associated template json file(s) to use? e.g.) info
…
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Hi @baifanxxx @BAAI-DCAI ,
thank you for this amazing work !
Im trying to do the inference of M3D-LaMed-Phi-3-4B
Th question I have is,
![image](https://github.com/user-attachments/assets/25827…
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list of "long" tests (function length > 50 lines) that are likely to contain too many asserts and could suffer "test pollution" and should probably be refactored.
```bash
$ flake8 nilearn/**/tests…
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bdata is a very convenient format, so I want to convert my nifti dataset to bData.
1. I read "example_fmriprep.ipynb" in the "examples" file to learn how to do the job. Is input dataset in (https…
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Nifti support in OHIF requires additional requirements gathering
Below are nifti csjs support tickets