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**This assignment involves:**
1. Unifying the terminology for each domains
2. Remove duplicated records
3. Split dataset to training/evaluation
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this query returns 243 rows
select * from v20240229_omop.concept_ancestor a where exists
(select from v20240229_omop.concept c where c.standard_concept is null and (c.concept_id = a.ancestor_conc…
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When trying to do ls on the synpuf-omop open-access bucket I'm getting an error. I tried on my machine and the AWS console cloudshell:
`$aws s3 ls --no-sign-request s3://synpuf-omop/`
An error o…
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The date ranges are not formatted right for oracle. ex), cond.condition_start_date BETWEEN '01-01-2021' AND '12-31-2021' for Oracle. Something like TO_DATE('21-12-31', 'RR-MM-DD')
dth.death_d…
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The N3C project requirements and DI&H processes require data outside a standard OMOP implementation. Primarily this information are data that are created or used by N3C processes in addition tot he s…
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So that the cohort table satisfies omop cdm cohort requirements we drop records that start outside of an observation period. It would be nice, I think, if we printed a cli message telling the user how…
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# Where and how to store Suspected Diagnosis in OMOP CDM
## CDM or THEMIS convention?
THEMIS
## Table or Field level?
Table
## Is this a general convention?
No
## Summary of issues
1. Where and ho…
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Resolve OMOP identifiers: http://api.ohdsi.org/WebAPI/vocabulary/concept/922802
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Hi, I would like to try OMOP on FHIR
I tried to build a docker and it was successful.
I wonder once we start the docker container, what exact URL to use?
I tried in open the browser like localh…
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# Adding a source value column for IDs to the visit_occurence table
## CDM or THEMIS convention?
THEMIS
## Table or Field level?
Field
## Is this a general convention?
No
## Summary of issues
- v…