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Hi @rybchuk ,
I hope you are doing great. I wanted to discuss a problem which I am facing. i think it is flow reversal.
[https://github.com/rybchuk/amr-wind-tutorial/blob/main/03_turbines.md](url),…
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Hi,
I am currently trying to test spectralis for de novo peptide sequencing of DDA datasets, and I currently have a problem.
While it is possible to get it running on a standard PC with open web con…
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These are just ideas:
- something made from raw meat
- something extracted from any harvested plant
- chemfuel, just straight chemfuel
- something made from silver
Maybe only 3 of those … and…
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Thank you for developing DIAgui!
I am wondering if the Peptides count is based on the Stripped or Modified Sequence count? Thanks.
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Hello, I was trying to cluster mzXML files from https://massive.ucsd.edu/ProteoSAFe/dataset.jsp?task=88a7dfeeecb74131a6d6bfb7a9db0a46 in WSL:Ubuntu-22.04 but it does not seem to recognize any spectra.…
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Hi,
Thanks for developing this amazing search engine!
I am working on searching cell proteome with two conditions (target KO vs WT). When I look at the precursors of the target protein in the pr…
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### Acknowledgements
- [X] I have [searched](https://github.com/open-goal/jak-project/issues?q=is%3Aissue+is%3Aopen+label%3Abug+label%3Ajak1+sort%3Aupdated-desc+) for duplicate or closed bug reports
…
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Hi Vlad,
I ran DIA-NN with the following argument on linux with immunepeptidome mzML input. We aimed to profile individual 9-mer peptide which is generated in the 9mer.fa input fasta file. Since we…
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**Describe the bug**
This is not really a bug, rather unexpected behaviour. The use case is a filtered spectral library which does not have the expected precursor & fragment order. It would be good t…
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