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**Describe the Error**
The function `anndataToGiotto`, even though it runs successfully, throws an error message.
This will happen if I use an alternative `env_name`.
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**Error Message**
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Currently, CSO classifier is using an outdated version of `python-igraph`. That results in error in the installation step.
I come from the `python-igraph` repository [https://github.com/igraph/pyth…
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Cel: poznać jak działa moduł `igraph` w pythonie
Link: https://python.igraph.org/en/stable/
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AFAIK networkx and python-igraph do the same thing, only that python-igraph is faster.
We also need python-igraph anyway for louvain and so on, so maybe it would be good to get rid of networkx.
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**Describe the bug**
With the Matplotlib backend, the 'diamond' shape has two problems:
- It is visually much smaller than other shapes. All shapes should appear to be the same size.
- Edges …
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Hi there, could you please offer a requirements.txt to show the required version of python, networkx, igraph? I cannot run the code using the up-to-date libraries. There might be some version unmatchi…
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You may want to look at how igraph's R and [redesigned Python](https://github.com/igraph/python-igraph-ctypes) interfaces are generated using the [Stimulus](https://github.com/igraph/stimulus/) interf…
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We would like to be able to compare performance to `igraph`: https://github.com/igraph/python-igraph
Some algorithms may be different, which can make direct comparisons difficult to do well (for ex…
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To whom it concerns:
I met some issues while installing the StrTrak, as the following shows:
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Traceback (most recent call last):
File "/home/wuzq-cdc/tools/StrTrak/./StrTrak", line 2, in
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When a graph has loops, the following error occurs (e.g., with PMA_EX_A000041 and `opts.isomethod = 'py-igraph'`):
```
Error using detectiso_igraph>detectiso
Python Error: InternalError: Error at
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