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### What happens?
I created a table with geometry column and add rtree index. I can make a query from the table just like usual, the issue came up when I tried to reconnect to the db.
```
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Voir aussi #1
Niveau bonnes pratiques, on pourrait ajouter des exemples dans la doc des fonctions. Les fichiers `notebooks/demo_*.R` ont l'air d'être des exemples. Êtes vous d'accord pour les inté…
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### Bug description
When using the `filename` argument within an ojs code block, the ojs filename is not added.
![Image](https://github.com/user-attachments/assets/b9636901-2869-4d84-80b7-45d9518242…
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_Broken out of #810_
We'll need to update the `cell-type-wilms-tumor-06/00_run_workflow.sh`script, along with a few updates to the module workflow. Specifically, we want to:
- Add a flag to the …
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The question comes up occasionally about whether a project can be referenced from a notebook. The use cases vary, so a discussion would be useful to understand the kinds of things people might want to…
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I get "AttributeError: module 'numpy' has no attribute 'math'" when I run cell [5] in the binder notebook
### Reproducing code example:
```
model = ps.SINDy()
model.fit(x_train, t=dt)
model.p…
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It would be nice to have a `.Rmd` file with an overview of the projects, with information such as:
- Number of stars on GH
- Scala LOC
- Version
- The number of:
- Implicit conversions (defi…
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Currently, much of the `cell-type-wilms-tumor-06` module is not run in CI due to issues we experienced getting the [`Azimuth::RunAzimuth()`](https://satijalab.github.io/azimuth/reference/RunAzimuth.ht…
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Dear developers,
I can't load the RCyjs in Jupyter notebooks.
I did a clear R installation (version 4.4.1) in an apptainer, and used Bioconductor version 3.20 to (only) install the package RCyjs…
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Link to MGnifyR notebooks on the MGnifyR README/website, as relevant?
- https://docs.mgnify.org/src/notebooks/R%20Examples/Comparative%20Metagenomics.html
- https://docs.mgnify.org/src/notebooks_lis…