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Thanks for making this extension available. I work with cifti files and often use the MMP cortical surface parcellation, and the subcortical parcellation will be very useful. Could you make the subcor…
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https://github.com/nipreps/nibabies/blob/8bcf2d7a7df8d8806722353000453cad2af7547b/nibabies/workflows/bold/alignment.py#L8
[Original implementation](https://github.com/DCAN-Labs/dcan-infant-pipeline…
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It looks like the _dseg.tsv files for the Harvard-Oxford atlases (cortical and subcortical) are missing.
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Hi!
Lately, I've been experiencing problems when running ciftify_subject_fmri. It seems like the subcortical structures are no longer recognized; I'm getting the following warnings/erros:
> WARN…
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### Description
Include visual representation of CBF with a Bull's eye approach. We could also think about other ways of visualization. See [BaMoS](https://www.researchgate.net/publication/3392915…
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Hi,
I noticed that the templates
tpl-PNC
tpl-NKI
tpl-OASIS30ANTs
contain subcortical gray matter as "label-SCGM". Would it be possible to rename these to label-SGM? Then all the labels woul…
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I found all the existing atlas with .aseg (subcortical components) contains only structures can be allocated in left/right lobe.
Is there any required modification for use custom atlas with structure…
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Hello,
First, thank you for creating this helpful package. I was able to utilize this package to create a nice visual representation of my data.
I was just wondering if ggseg() or ggplot()+geom_…
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Hi! Thank you so much for all your work on the ggseg and ggsegExtra repos @drmowinckels ! I have gone through the tutorials for creating a new subcortical atlas, and I basically have it working for th…