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`README.md` needs to be updated for Katana world.
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1. cpp: algorithms are splitted to core, procedure and standalone. Users can not upload a single procedure file now.
2. zip: unzip command not found in remote environment
3. so: compile so in compil…
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With the following input file (named gallery.toml)
```
[output]
displayed_results_count = 31
[input]
url_prefix = "/gallery/"
frontmatter_handling = "Omit"
stemming = "None"
…
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Hello Wenbao @wbaopaul ,
I am using v1.5.1 on one of my samples , and I'm using scATAC-pro reprocess because I have my bam files from cell ranger and then using scATAC-pro downstream .
I am run…
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### Please make sure these conditions are met
- [X] I have checked that this issue has not already been reported.
- [X] I have confirmed this bug exists on the latest version of scanpy.
- [ ] (op…
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In util file ,there is not graph_helper!
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Hi @sanjaypojo
So in one of my treemaps I want to assign a color based on the location of the institution, I already created a function to do so, but when I tried to pass **colorKey** to the treem…
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Hello, sorry to interrupt you. When I was processing my data, I found that this error always occurred.
[accran5j3j@01b8bd6d79ac scripts_analysis]$ python generate_kmeans.py --config ../../config/live…
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I am using a python 3.7 version and could not install MulticoreTSNE using conda, or using pip (pip install MulticoreTSNE) since it tries to downgrade a few installed packages, including python itself …
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Dear Mr. AntonioDeFalco,
Last day, I just re-running one sample data, then I found it seems like the results have some different. The tsne_scRNA.png, subclone numbers and tumor-No tumor identify was …