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https://mp.weixin.qq.com/s/GZAoS1ACW6IsN8kuAVZzew
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hello, recently I use the scanpy package to preprocess the single cell rna-seq data, the following is my process step. But when I go to the last step, namely I want to scale the dataset, the error occ…
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I've been trying to root-cause the OOM issue with specific Magma queries, and I think @corps is correct in what is happening. A good fix is currently beyond my brainstorming abilities -- I've played a…
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Dear Kai,
Good idea with the program,which can be applicable to split-seq that just what i need.
I am having difficulties running the script:
Running preflight checks (please wait)...
11:58:14 […
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https://mp.weixin.qq.com/s/bObgu2Z90_qd5GYaVn4oJw
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It appears that there are 7 additional transcripts in `TRNSCRPT_WATSC_NORM_DATA` that should not be there, assuming the dataset was generated with `MotrpacRatTraining6mo::transcript_normalize_counts`.…
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Hello!
I've tried to run the whole GeMoMa pipeline for a couple of times. I was able to run it using the evidence from one reference species (obtained with BRAKER). However, when I try to include s…
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https://mp.weixin.qq.com/s/9DjEipFIFKZspx7zlwTM3w
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I am trying to use Visium data. However, it seems ICELLNET do not support Visium RDS data as it shows an error when I am trying to implement this code:
`average.clean= sc.data.cleaning(object = seura…
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https://mp.weixin.qq.com/s/9DjEipFIFKZspx7zlwTM3w