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Currently the plotting method simply shows equally spaced points on the pdf/cdf.
For many distributions this is insufficient - the spacing should be concentrated on positions of change.
The exampl…
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**Attach your log [file**]
[ArchR-addMotifAnnotations-1ae2429e816fd-Date-2020-11-30_Time-21-18-52.log](https://github.com/GreenleafLab/ArchR/files/5618553/ArchR-addMotifAnnotations-1ae2429e816fd-Date…
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Here is the example of the dataset used:
```
dataLinks
# LinkStartLabel LinkStartChrom LinkStartFrom LinkStartEnd LinkEndLabel LinkEndChrom LinkEndFrom LinkEndEnd
# 1 DIMT1L chr5 …
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Following the 1st project on this vignette, every step was properly executed. This error pops up when running pbmc
The bug is reproducible.
Everything is the same as written on your vignette.…
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- Repository: https://github.com/markrobinsonuzh/treeAGG
- [x] I understand that by submitting my package to _Bioconductor_,
the package source and all review commentary are visible to the
ge…
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Now that you've solved my problem of loading files (thanks!!) I was wondering if there's a way to incorporate a few more details in some of the plots. Perhaps it's just a matter of manipulating the av…
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Adding genome from `BSgenome` object produces the error similar to #393
To reproduce it:
```
library(ArchR)
library(BSgenome.Dmelanogaster.UCSC.dm6)
genomeAnnotation Getting genome..
> Getting …
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Hello - love the program.
1. I was wondering if there is a sensible way to extract the chromosome and base pair position within the list generated in the output provided in the [documentation](htt…
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The simple document,
``````
---
output: pdf_document
---
```{r, fig.align='center'}
plot(cars)
```
``````
fails to compile, giving this error:
```
! Undefined control sequence.
l.95 \begin{cent…
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---
I am using geom_area for stacked area chart showing cumulative results for categories.
For some series the cumulative result turns negative from time to time and this have been working nicely …