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@dlebauer or @gsrohde I'm trying to upload to betydb a small data-set of stalk diameter field measurements. The data set has 2 newly defined trait variable names that both need to connect to the requ…
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Review issue for the fullfield extractor and output using flir thermal IR inputs.
Completion criteria:
* [ ] Code review complete (includes extractor, any functions in terrautils, etc)
* [x] Sa…
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In order to complete #309 we need to add BETYdb functions for getting and posting data to Bety Postres database.
Some code already (partially) exists:
- https://github.com/terraref/terrautils/blob…
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Update: they don't match, so will make new polygons. https://github.com/terraref/computing-pipeline/issues/187#issuecomment-256760060 below:
For reference, we have two sets of polygons
1. those ma…
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There is a list of indices we are computing here https://github.com/terraref/documentation/blob/master/spectral_indices.md
These need to be added to the variables table in BETYdb at betydb.org and …
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@gsrohde I've formatted 3 spreadsheets that are probably close to being ready for Betydb using the API upload process (because they have time data). I'll need your help reviewing to see if they are i…
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The app in PR terraref/reference-data#110 provides a Python Flask app that summarizes available data in BETYdb, with daily updates
I got it close to running thus:
```
cd /gpfs/largeblockFS/pro…
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### Description
New feature: I would like to be able to import entire BetyDB on a regular schedule e.g. daily.
### Details
Importing BetyDB would allow us to have the entire dataset available loc…
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Currently I need to get sites limited by experiment. in python my pseudocode is kind of ugly:
```
get_sites_by_experiment(date)
1. query experiments table with associations_mode='full_info'
2. for…
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### Description
Functionality will be extended so that all trait data from BETYdb from a given experiment for a given variable will be presented in the visualizations.
### Completion Criteria
- […