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Text is missing here:
the-cause-of-autoimmune-diseases-are-unknown-part-2
original post: https://factastichealth.com/the-cause-of-autoimmune-diseases-are-unknown-part-2
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Wow, this is all really cool stuff! I have basically zero familiarity with metabarcoding, so I just had some questions about it!
First, what's the original source of your samples from the bats/mice…
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Dear ALL,
I was wandering about the truncLen parameter settings in filterAndTrim that you would suggest for the reads, the QC graphs of which are attached as the PDF files.
I used primers 341F a…
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In `match_otu_mapping.py` line 24, you call `hf.match_otu_qual(otu, qual_vecs)`, however no such function is defined in `helper_functions.py`.
I am not sure if I know exactly what this line is supp…
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We have included a mock community sample in our analysis.
This mock comprises 8 species.
Dada produces 273 ASVs for this sample.
When we cluster the ASV sequences with decipher they form 8 well def…
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Do you have any additional datasets you like to add/(have added) to `microbiomeDataSets`?
@antagomir @dombraccia @microsud @fionarhuang
Anything against submitting the datasets first after some…
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Hi @gurusabarish,
First of all, thank you for putting hugo-profile together, I really like the layout for my personal site.
However, I am having trouble with a few things.
1. I am having tro…
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## Overview
Write a method to obtain citation information from PubMed using the `RISmed` package. The method, `PubMed`, should return a `list` of three `data.frame` objects containing citation info…
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Nice to meet you, Lianmin Chen.
I am a student in Fudan University and new to microbiological network inference. I have read the paper [Gut microbial co-abundance networks show specificity in infla…
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Hi @aametwally,
I'm currently working on a project investigating potential changes in gut microbiome over time (within a 24 hour period).
I feel this is likely more of an experimental design q…