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https://github.com/DataBiosphere/azul/actions/runs/344468542
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This is a spin out from #2008, where we have agreed to adopt the black code formatting tool for Biopython:
https://github.com/psf/black
That issue focused on applying black to the main code base…
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With reference to the instructions given in: http://prody.csb.pitt.edu/tutorials/evol_tutorial/evolapps.html
please note that the command: **evol search 2W5IB** results in the following error messa…
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Hi, still trying to get a successful run on Example 02 tree of life. I'm using the first 10 files in input_genomes to make a shorter test.
`
Traceback (most recent call last):
File "/tigress/M…
mcahn updated
4 years ago
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**Submitting author:** @berenger-eu (Bérenger Bramas)
**Repository:** https://gitlab.inria.fr/bramas/tbfmm
**Version:** v1.0
**Editor:** @poulson
**Reviewer:** @pitsianis, @Himscipy, @sarats
**Archive…
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### Setup
I am reporting a problem with Biopython version, Python version, and operating
system as follows:
```python
import sys; print(sys.version)
```
3.6.2 (default, Aug 11 2017, 16:17:11…
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This is a continuation of the discussion that happened in the PR #2834
> @davydden
>
> > it depends... Without an intention to start a flame,
>
> I think we always maintain a safe distance to a …
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Dear Shah Lab Members,
I'm a software user which want to study your results and use different models in your package. Unfortunately, I can only find one example in the main page of this package: (h…
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I've seen http://docs.rigetti.com/en/stable/ which includes some of the API strings via https://github.com/rigetti/pyquil/tree/master/docs/source/apidocs and Sphinx.
Initially assuming you used all…
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`[e] expected str, bytes or os.PathLike object, not NoneType`
`[e] gene_markers_selection crashed`
`output_tree/tmp/map_dna/JIAJIAN16_Bin_002.LargeContigs.b6o.bz2" generated in 1s`
What does th…