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**_EDIT: To successfully build QSV support on Fedora 28, Intel Media SDK "MediaStack" must be installed
EDIT2: The QSV does not work with GUI, it is usable on CLI_**
### Description of the probl…
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Just wondering about an idea that might take more effort than it's worth to implement. Hoping it might be useful to at least start a discussion about this idea?
### Part 1
Has there already been d…
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There are few issues:
1. vpic grid does not change with time. However, when parsing a vpic file, viscid tries to iterate over all time steps (and all spatial blocks). When the data contain many tim…
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Below is my output from running the given example:
```
>>> python USim.py parse out.out -ss "I love rusty spoons", "nothing matters" -rs "he shares pretty cars", "nothing indeed"
/usr/local/lib…
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E.g. control verbs should coindex the subject NP of the complement with the subject of the matrix verb: something like (S\NP.1)/(S[inf]\NP.1) for "want" and (S[inf]\NP.1)/(S[b]\NP.1) for "to" in "I wa…
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Just something I've noticed which I want to keep track of is the packaging of OpenShot. From working with an AppImage to working with my own version built from Source I noticed a huge difference.
…
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Hi,
Would it be possible to add a flag which expands the CSQ field in separate INFO fields as per the VCF standard? The CSQ tag can become quite confusing and hard to parse as the number of annotat…
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Pysam fails parsing VCFs created by the gnomAD project. The issue is that these VCFs define records such as:
```
##INFO=
```
which pysam explicitely ignores:
```
import pysam
fn = "gnomad.genom…
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To make informed security decisions, reliers need to know whether an OAuth flow was completed using MFA and may want to inspect the details of what kind of MFA took place. We need to decide on an API…
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Hi Brent,
I've encountered a small issue where some annotations have gone missing.
I annotated a vcf file with SnpEff using the following command:
```
export PATH=/home/galaxy/bcbio-dev/anaconda…