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I'm trying to setup a few things using conda on ubuntu 18.04
I have installed astra-toolbox using `conda install -c astra-toolbox astra-toolbox` to do reconstructions.
For CT segmentation I'm now …
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This is a suggestion I raised at the pillar 6 meeting. Now that the number of sequences deposited in the VirusSeq portal is close to the number in GISAID, it should be possible to base the notebook e…
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If the detector is configured inside the reconstruction volume (i.e. at the origin) the interpolation forward projector appears to clip at the detector rather than extending through the reconstruction…
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Hi,
this just popped up based on a recent run:
* `kraken2` found here ~900 reads assigned to SARS-CoV-2 from a negative control
* however, after the read length filtering step only ~10 reads …
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Hi, I'm a beginner learning CT image reconstruction. I'm currently having some confusion on Ramp Filter generation. It would be very nice if you can help me with these questions.
Please see: https:…
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Hi, I was just wondering how to get skeleton and synapse data from the .nmx files?
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Hello! It is shown that ''par_projection3d'' function is not in ''pyronn.ct_reconstruction.layers.projection_3d'' package during operation, causing example_parallel_3d.py to report an error of missin…
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The single DICOM file, which contains multiple slices, has "SliceThickness = 0.5".
Some other tags are shown as following:
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I have a research paper on [adding color to scene reconstruction](https://github.com/philipturner/scene-color-reconstruction) that just got rejected from openMVG/awesome_3DReconstruction_list. Would m…
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Hi,
It was a great work. But will you open source code? It seems that seven months have passed.